Welcome to Mitoverse¶
Mitoverse is an analysis platform and provides several tools for the analysis of mtDNA sequencing reads.
Currently the following tools are available:
- Haplocheck for in-sample contamination detection starting from BAM or VCF files.
- mtDNA-Server for mtDNA variant detection as a service.
- Mutserve for local mtDNA variant detection (used by mtDNA-Server).
To run the tools you can either use our cloud web service or download it from Github.
For mtDNA haplogroup classification, we developed Haplogrep that has also been integrated into haplocheck. If you want to use Haplogrep as a stand-alone tool, you can download it from here or use our cloud web service.